Commit de1405cd authored by Jorge Navarro Muñoz's avatar Jorge Navarro Muñoz

Docker: updated docker files

parent e86a689d
...@@ -21,6 +21,7 @@ RUN cd BiG-SCAPE \ ...@@ -21,6 +21,7 @@ RUN cd BiG-SCAPE \
&& hmmpress Pfam-A.hmm \ && hmmpress Pfam-A.hmm \
&& chmod +x /usr/src/BiG-SCAPE/*py \ && chmod +x /usr/src/BiG-SCAPE/*py \
&& chmod a+w /usr/src/BiG-SCAPE/domains_color_file.tsv \ && chmod a+w /usr/src/BiG-SCAPE/domains_color_file.tsv \
&& chmod a+w /usr/src/BiG-SCAPE/Annotated_MIBiG_reference/ \
&& chmod 777 /home && chmod 777 /home
USER 1000:1000 USER 1000:1000
......
...@@ -5,7 +5,7 @@ if [[ $# -eq 0 || $1 == "-h" || $1 == "--help" || $1 == "--version" ]]; then ...@@ -5,7 +5,7 @@ if [[ $# -eq 0 || $1 == "-h" || $1 == "--help" || $1 == "--version" ]]; then
--detach=false \ --detach=false \
--rm \ --rm \
--user=$(id -u):$(id -g) \ --user=$(id -u):$(id -g) \
docker-registry.wur.nl/medema-group/big-scape:20191010 \ docker-registry.wur.nl/medema-group/big-scape:v1.0.1 \
$@ $@
else else
set -o errexit set -o errexit
...@@ -51,7 +51,7 @@ else ...@@ -51,7 +51,7 @@ else
--detach=false \ --detach=false \
--rm \ --rm \
--user=$(id -u):$(id -g) \ --user=$(id -u):$(id -g) \
docker-registry.wur.nl/medema-group/big-scape:20191010 \ docker-registry.wur.nl/medema-group/big-scape:v1.0.1 \
-i ${CONTAINER_SRC_DIR}/${INPUT_FILE} \ -i ${CONTAINER_SRC_DIR}/${INPUT_FILE} \
-o ${CONTAINER_DST_DIR}/${OUTPUT_FILE}\ -o ${CONTAINER_DST_DIR}/${OUTPUT_FILE}\
$@ $@
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment