Update caretta-cli

bin/caretta-cli

@@ -8,7 +8,7 @@ from caretta import msa_numba
 
 
 def align(input_pdb,
-          dssp_dir="caretta_tmp", num_threads=20, extract_all_features=True,
+          dssp_dir="caretta_tmp", num_threads=20, extract_all_features=False,
           gap_open_penalty=1., gap_extend_penalty=0.01, consensus_weight=1.,
           write_fasta=True, output_fasta_filename=Path("./result.fasta"),
           write_pdb=True, output_pdb_folder=Path("./result_pdb/"),