From 91b6ae6354453e44e63ce8e8c2487716fc68c4d4 Mon Sep 17 00:00:00 2001 From: Wouter Peters <wouter.peters@wur.nl> Date: Tue, 11 Jun 2013 11:32:15 +0000 Subject: [PATCH] the start_ctdas script now makes a new folder and first copies all python files to it --- start_ctdas.sh | 24 +++++++++++++++++------- template.jb | 6 +++--- template.rc | 2 +- 3 files changed, 21 insertions(+), 11 deletions(-) diff --git a/start_ctdas.sh b/start_ctdas.sh index 7ed92e21..c5dcea93 100755 --- a/start_ctdas.sh +++ b/start_ctdas.sh @@ -1,14 +1,24 @@ #! /bin/sh -echo "New project to be started with name $1" -echo "Copying jb file, py file, and rc-file" -sed -e "s/template/$1/g" template.jb > $1.jb -sed -e "s/template/$1/g" template.py > $1.py -sed -e "s/template/$1/g" template.rc > $1.rc +echo "New project to be started in folder $1" +echo " ...........with name $2" -chmod u+x $1.jb +rootdir=$1/$2 +rundir=$1/$2/exec + +mkdir -p ${rundir} +rsync -auvz * ${rundir}/ +cd ${rundir} + +echo "Creating jb file, py file, and rc-file" +sed -e "s/template/$2/g" template.jb > $2.jb +sed -e "s/template/$2/g" template.py > $2.py +sed -e "s/template/$2/g" template.rc > $2.rc + +chmod u+x $2.jb echo "************* NOW USE ****************" -ls -lrta $1.* +ls -lrta $2.* echo "**************************************" +echo "after cd ${rundir}" diff --git a/template.jb b/template.jb index c15b2573..e7c508ba 100755 --- a/template.jb +++ b/template.jb @@ -10,6 +10,6 @@ echo ######################## -module load tm5/mpi -module load ctdas -python template.py rc=template.rc $1 +module load intel/latest/tm5 +module load python/2.6 +/opt/local/bin/python template.py rc=template.rc $1 >& template.log & diff --git a/template.rc b/template.rc index 0366fa30..10678a5d 100644 --- a/template.rc +++ b/template.rc @@ -5,7 +5,7 @@ time.start : 2005-01-01 00:00:00 time.finish : 2011-01-01 00:00:00 time.cycle : 10 time.nlag : 3 -dir.da_run : /archive/peters/template +dir.da_run : templaterundir ! Info on the DA system used -- GitLab