From 6f592a55c1f72da43fddd6e7e7ecf21bc60ce28e Mon Sep 17 00:00:00 2001
From: Aki Tsuruta <Aki.Tsuruta@fmi.fi>
Date: Sun, 5 Feb 2017 19:53:56 +0000
Subject: [PATCH]
---
da/tm5/methaneobservationoperator.py | 91 ++++++++++++++++++++++++++++
1 file changed, 91 insertions(+)
create mode 100755 da/tm5/methaneobservationoperator.py
diff --git a/da/tm5/methaneobservationoperator.py b/da/tm5/methaneobservationoperator.py
new file mode 100755
index 00000000..394d6939
--- /dev/null
+++ b/da/tm5/methaneobservationoperator.py
@@ -0,0 +1,91 @@
+#!/usr/bin/env python
+# tm5_tools.py
+
+"""
+Author : Aki
+
+File created on Feb 2010.
+"""
+
+import os
+import sys
+import logging
+import shutil
+import datetime
+import subprocess
+from string import join
+import glob
+sys.path.append(os.getcwd())
+sys.path.append("../../")
+
+import da.tools.rc as rc
+from da.tools.general import create_dirs, to_datetime
+from da.baseclasses.observationoperator import ObservationOperator
+from da.tm5.observationoperator import TM5ObservationOperator
+
+def validate_rc_methane(self):
+ """
+ Validate the contents of the tm_settings dictionary and add extra values. The required items for the TM5 rc-file
+ are specified in the tm5_tools module, as dictionary variable "needed_rc_items".
+ """
+
+ if self.rcfiletype == 'pycasso':
+ self.projectkey = 'my.project.dir'
+ self.rundirkey = 'my.run.dir'
+ self.outputdirkey = 'output.dir'
+ self.savedirkey = 'restart.write.dir'
+ self.timestartkey = 'timerange.start'
+ self.timefinalkey = 'timerange.end'
+ self.timelengthkey = 'jobstep.length'
+ self.istartkey = 'istart'
+ self.restartvalue = 33
+ self.coldstartvalue = 5 #Aki: read from mmix file
+ self.transitionvalue = 61
+ self.mysourcedirs = 'my.source.dirs'
+ self.addedsourcedirs = ' proj/levels/ml91/trunk proj/levels/ml91/tropo34/trunk'
+ else:
+ self.projectkey = 'runid'
+ self.rundirkey = 'rundir'
+ self.outputdirkey = 'outputdir'
+ self.savedirkey = 'savedir'
+ self.timestartkey = 'time.start'
+ self.timefinalkey = 'time.final'
+ self.timelengthkey = 'time.break.nday'
+ self.istartkey = 'istart'
+ self.restartvalue = 3
+ self.coldstartvalue = 9
+ self.transitionvalue = 61
+
+ needed_rc_items = [
+ self.projectkey,
+ self.rundirkey,
+ self.outputdirkey,
+ self.savedirkey,
+ self.timestartkey,
+ self.timefinalkey,
+ self.timelengthkey,
+ self.istartkey
+ ]
+
+ for k, v in self.tm_settings.iteritems():
+ if v == 'True' : self.tm_settings[k] = True
+ if v == 'False': self.tm_settings[k] = False
+ if 'date' in k : self.tm_settings[k] = to_datetime(v)
+ if 'time.start' in k :
+ self.tm_settings[k] = to_datetime(v, fmt='TM5')
+ if 'time.final' in k :
+ self.tm_settings[k] = to_datetime(v, fmt='TM5')
+ if 'timerange.start' in k :
+ self.tm_settings[k] = to_datetime(v)
+ if 'timerange.end' in k :
+ self.tm_settings[k] = to_datetime(v)
+
+ for key in needed_rc_items:
+ if not self.tm_settings.has_key(key):
+ msg = 'Missing a required value in rc-file : %s' % key
+ logging.error(msg)
+ raise IOError, msg
+ logging.debug('rc-file has been validated succesfully')
+
+TM5ObservationOperator.validate_rc = validate_rc_methane
+
--
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